Journal Article 1 Mention
Accelerating scientific discovery with Co-Scientist
Juraj Gottweis•2026
Wei‐Hung WengAlexander Daryin
Top 1% · 100th Percentile
147 citations · Computational Theory and Mathematics
Open AccessAI-based genetic discovery for hearing loss

TLDR

A computer partner generated promising scientific ideas by searching information, criticizing its own suggestions, and improving them repeatedly. Some ideas worked in laboratory tests, but human scientists still need to check them carefully before real-world use.

Summary

1 Study Aim

The study aimed to develop and test Co-Scientist, a multi-agent artificial intelligence (AI) system (computer agents working together), for generating novel, testable scientific hypotheses. The authors asked whether increasing its reasoning time and computational effort would improve hypothesis quality and whether expert scientists could use it across biomedical problems. The system was designed to help scientists find and test useful new ideas faster.

2 Study Design

Co-Scientist used Gemini 2.0 models, an asynchronous task framework, persistent memory, literature searches, and specialized agents for generation, reflection, ranking, evolution, and review. An Elo-based tournament (a repeated contest ranking ideas against each other) compared hypotheses as the system used test-time computation (extra processing during an answer). Evaluations covered 203 research goals, 15 expert-curated biomedical goals, and 11 blinded expert assessments. Laboratory tests examined five cell lines in biological triplicates. The team studied acute myeloid leukemia (AML), liver fibrosis, and antimicrobial resistance. The researchers combined computer comparisons, expert judgments, literature checks, and preliminary laboratory experiments.

3 Findings

The study reports that later hypotheses improved across 203 goals as computation increased. Co-Scientist eventually outperformed comparison models and experts in automated rankings, while experts preferred its outputs in a small blinded assessment. In AML, laboratory tests supported activity from several repurposed drugs, including Binimetinib, Pacritinib, Cerivastatin, and the novel candidate KIRA6. Several proposed drug combinations were synergistic (stronger together) in some leukemia cell lines. The system also identified epigenetic targets (gene-control changes) for liver fibrosis, with two drugs reducing fibrosis in liver organoids (small lab-grown tissues). It proposed a mechanism for bacterial gene transfer that matched independent experimental work. The authors stress that these results are preliminary, limited by literature quality, model errors, small evaluations, and laboratory-only testing. The findings suggest faster idea generation, not a replacement for expert review, rigorous experiments, or clinical trials.

Abstract

Abstract Scientific discovery is driven by scientists generating hypotheses for complex problems that undergo rigorous experimental validation. To augment this process, we introduce Co-Scientist, a multi-agent artificial intelligence (AI) system built on Gemini for structured scientific thinking and hypothesis generation. Co-Scientist aims to help scientists discover new original knowledge. Conditioned on their research objectives and previous scientific evidence, it formulates demonstrably novel research hypotheses for experimental verification. The system’s design involves agents continuously generating, critiquing and refining hypotheses accelerated by scaling test-time compute. Key contributions include (1) a multi-agent architecture with an asynchronous task execution framework for flexible compute scaling, and (2) a tournament evolution process for self-improving hypotheses generation. Automated evaluations show continued benefits of test-time compute scaling, improving hypothesis quality over time. Although this is a general-purpose system, we focus the validation in three biomedical applications: drug repurposing; novel-target discovery 1 ; and explaining mechanisms of antimicrobial resistance 2 . Specifically, Co-Scientist helped to identify new drug-repurposing candidates and synergistic combination therapies for acute myeloid leukaemia that were validated through in vitro experiments. These real-world validations demonstrate the potential of Co-Scientist to accelerate scientific discovery and usher in an era of AI-empowered scientists.

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